Uses of Interface
fr.ifremer.isisfish.entities.Population

Packages that use Population

Package	Description
fr.ifremer.isisfish.datastore	Data storage.
fr.ifremer.isisfish.datastore.migration	Database storage migration.
fr.ifremer.isisfish.entities	Entité metier d'IsisFish.
fr.ifremer.isisfish.equation
fr.ifremer.isisfish.simulator
fr.ifremer.isisfish.ui.input
fr.ifremer.isisfish.ui.input.check
fr.ifremer.isisfish.ui.input.model
fr.ifremer.isisfish.ui.input.tree.loadors
fr.ifremer.isisfish.ui.simulator

Uses of Population in fr.ifremer.isisfish.datastore

Methods in fr.ifremer.isisfish.datastore with parameters of type Population

Modifier and Type	Method and Description
void	ResultStorage.addResult(boolean force, TimeStep step, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultMappedStorage.addResult(boolean force, TimeStep step, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultStorageInMemory.addResult(boolean force, TimeStep step, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultDatabaseStorage.addResult(boolean force, TimeStep step, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultStorage.addResult(boolean force, TimeStep step, String name, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultMappedStorage.addResult(boolean force, TimeStep step, String name, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultStorageInMemory.addResult(boolean force, TimeStep step, String name, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultDatabaseStorage.addResult(boolean force, TimeStep step, String name, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultStorage.addResult(TimeStep step, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultMappedStorage.addResult(TimeStep step, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultStorageInMemory.addResult(TimeStep step, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultDatabaseStorage.addResult(TimeStep step, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultStorage.addResult(TimeStep step, String name, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultMappedStorage.addResult(TimeStep step, String name, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultStorageInMemory.addResult(TimeStep step, String name, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultDatabaseStorage.addResult(TimeStep step, String name, Population pop, org.nuiton.math.matrix.MatrixND mat)
org.nuiton.math.matrix.MatrixND	ResultStorage.getMatrix(Population pop, String name) Retourne une matrice contenant tous les pas de temps.
org.nuiton.math.matrix.MatrixND	ResultMappedStorage.getMatrix(Population pop, String name) Retourne une matrice contenant tous les pas de temps.
org.nuiton.math.matrix.MatrixND	ResultStorageInMemory.getMatrix(Population pop, String name)
org.nuiton.math.matrix.MatrixND	ResultDatabaseStorage.getMatrix(Population pop, String name)
org.nuiton.math.matrix.MatrixND	ResultStorage.getMatrix(Population pop, String name, org.nuiton.topia.TopiaContext tx) Retourne une matrice contenant tous les pas de temps.
org.nuiton.math.matrix.MatrixND	ResultMappedStorage.getMatrix(Population pop, String name, org.nuiton.topia.TopiaContext tx)
org.nuiton.math.matrix.MatrixND	ResultStorageInMemory.getMatrix(Population pop, String name, org.nuiton.topia.TopiaContext tx)
org.nuiton.math.matrix.MatrixND	ResultDatabaseStorage.getMatrix(Population pop, String name, org.nuiton.topia.TopiaContext tx)
org.nuiton.math.matrix.MatrixND	ResultStorage.getMatrix(TimeStep step, Population pop, String name) Retourne la matrice stocke pour un pas de temps
org.nuiton.math.matrix.MatrixND	ResultMappedStorage.getMatrix(TimeStep step, Population pop, String name) Retourne la matrice stocke pour un pas de temps
org.nuiton.math.matrix.MatrixND	ResultStorageInMemory.getMatrix(TimeStep step, Population pop, String name)
org.nuiton.math.matrix.MatrixND	ResultDatabaseStorage.getMatrix(TimeStep step, Population pop, String name)
org.nuiton.math.matrix.MatrixND	ResultMappedStorage.getMatrix(TimeStep step, Population pop, String name, org.nuiton.topia.TopiaContext tx) Retourne la matrice stocke pour un pas de temps
protected Map<TimeStep,ResultMappedStorage.ResultMapped>	ResultMappedStorage.getResult(String name, Population pop)
protected ResultMappedStorage.ResultMapped	ResultMappedStorage.getResult(TimeStep step, String name, Population pop)

Uses of Population in fr.ifremer.isisfish.datastore.migration

Methods in fr.ifremer.isisfish.datastore.migration with parameters of type Population

Modifier and Type	Method and Description
protected String	MigrationV33V40.getReproductionRateContent(Population pop, List<Object[]> reproductionResults) Return reproduction rate equation content generated from previous group reproduction rate fields (v3).

Uses of Population in fr.ifremer.isisfish.entities

Classes in fr.ifremer.isisfish.entities with type parameters of type Population

Modifier and Type	Class and Description
class	PopulationDAOAbstract<E extends Population>
class	PopulationDAOImpl<E extends Population>

Classes in fr.ifremer.isisfish.entities that implement Population

Modifier and Type	Class and Description
class	PopulationAbstract
class	PopulationImpl PopulationImpl.

Fields in fr.ifremer.isisfish.entities declared as Population

Modifier and Type	Field and Description
protected Population	PopulationGroupAbstract.population Nom de l'attribut en BD : population
protected Population	PopulationSeasonInfoAbstract.population Nom de l'attribut en BD : population
protected Population	SelectivityAbstract.population Nom de l'attribut en BD : population

Fields in fr.ifremer.isisfish.entities with type parameters of type Population

Modifier and Type	Field and Description
protected Collection<Population>	SpeciesAbstract.population Nom de l'attribut en BD : population

Methods in fr.ifremer.isisfish.entities that return Population

Modifier and Type	Method and Description
Population	PopulationGroupAbstract.getPopulation()
Population	Selectivity.getPopulation()
Population	PopulationGroup.getPopulation()
Population	PopulationSeasonInfoAbstract.getPopulation()
Population	SelectivityAbstract.getPopulation()
Population	PopulationSeasonInfo.getPopulation()
Population	Species.getPopulationByTopiaId(String topiaId)
Population	SpeciesAbstract.getPopulationByTopiaId(String topiaId)

Methods in fr.ifremer.isisfish.entities that return types with arguments of type Population

Modifier and Type	Method and Description
Collection<Population>	Species.getPopulation()
Collection<Population>	SpeciesAbstract.getPopulation()

Methods in fr.ifremer.isisfish.entities with parameters of type Population

Modifier and Type	Method and Description
void	Species.addPopulation(Population population)
void	SpeciesAbstract.addPopulation(Population population)
List<E>	PopulationSeasonInfoDAOAbstract.findAllByPopulation(Population v)
List<E>	PopulationGroupDAOAbstract.findAllByPopulation(Population v)
List<E>	SpeciesDAOAbstract.findAllContainsPopulation(Population v)
E	PopulationSeasonInfoDAOAbstract.findByPopulation(Population v)
E	PopulationGroupDAOAbstract.findByPopulation(Population v)
E	SpeciesDAOAbstract.findContainsPopulation(Population v)
double	SelectivityImpl.getCoefficient(Population pop, PopulationGroup group, Metier metier)
double	Selectivity.getCoefficient(Population pop, PopulationGroup group, Metier metier)
Selectivity	Gear.getPopulationSelectivity(Population population)
Selectivity	GearAbstract.getPopulationSelectivity(Population population)
void	Species.removePopulation(Population population)
void	SpeciesAbstract.removePopulation(Population population)
void	PopulationGroupAbstract.setPopulation(Population population)
void	SelectivityImpl.setPopulation(Population value)
void	Selectivity.setPopulation(Population population)
void	PopulationGroup.setPopulation(Population population)
void	PopulationSeasonInfoAbstract.setPopulation(Population population)
void	SelectivityAbstract.setPopulation(Population population)
void	PopulationSeasonInfo.setPopulation(Population population)

Method parameters in fr.ifremer.isisfish.entities with type arguments of type Population

Modifier and Type	Method and Description
void	Species.addAllPopulation(Collection<Population> population)
void	SpeciesAbstract.addAllPopulation(Collection<Population> population)
void	Species.setPopulation(Collection<Population> population)
void	SpeciesAbstract.setPopulation(Collection<Population> population)

Uses of Population in fr.ifremer.isisfish.equation

Methods in fr.ifremer.isisfish.equation with parameters of type Population

Modifier and Type	Method and Description
double	PopulationReproductionEquation.compute(SimulationContext context, org.nuiton.math.matrix.MatrixND N, Population pop, Month month, double prepro, List<Zone> zoneRepro, List<PopulationGroup> groups, List<Zone> zones, org.nuiton.math.matrix.MatrixND result) Compute reproduction equation.
double	EmigrationEquation.compute(SimulationContext context, org.nuiton.math.matrix.MatrixND N, Population pop, PopulationGroup group, Zone departureZone) Compute emigration equation.
double	ImmigrationEquation.compute(SimulationContext context, org.nuiton.math.matrix.MatrixND N, Population pop, PopulationGroup group, Zone arrivalZone) Compute immigration equation.
double	MigrationEquation.compute(SimulationContext context, org.nuiton.math.matrix.MatrixND N, Population pop, PopulationGroup group, Zone departureZone, Zone arrivalZone) Compute migration equation.
double	SelectivityEquation.compute(SimulationContext context, Population pop, PopulationGroup group, Metier metier) Compute selectivity.
double	PopulationCapturabilityEquation.compute(SimulationContext context, Population pop, PopulationGroup group, PopulationSeasonInfo season) Compute capturability equation.
double	PopulationNaturalDeathRate.compute(SimulationContext context, Population pop, PopulationGroup group, Zone zone) Compute natural death rate.

Uses of Population in fr.ifremer.isisfish.simulator

Fields in fr.ifremer.isisfish.simulator with type parameters of type Population

Modifier and Type	Field and Description
protected Map<Population,org.nuiton.math.matrix.MatrixND>	PopulationMonitor.catchs catch per population, only last catch is remaining
protected Map<Population,Map.Entry<TimeStep,org.nuiton.math.matrix.MatrixND>>	PopulationMonitor.discards discard key: <date, pop> value:<MatrixND>
protected Map<Population,org.nuiton.math.matrix.MatrixND>	PopulationMonitor.holdCatchs catch per population, only last catch is remaining
protected Map<Population,org.nuiton.math.matrix.MatrixND>	PopulationMonitor.Ns current number of fish by Pop
protected Map<Population,org.nuiton.math.matrix.MatrixND>	SimulationParameterImpl.numbers Les effectifs initiaux des différentes population.
protected List<Population>	PopulationMonitor.pops La liste des pops monitorer par cette instance
protected List<Population>	SimulationParameterImpl.populations La liste des populations a utiliser pour la simulation.
protected Map<Population,Map<TimeStep,org.nuiton.math.matrix.MatrixND>>	PopulationMonitor.reproductions reproduction key: <date, pop> value:<MatrixND>

Methods in fr.ifremer.isisfish.simulator that return types with arguments of type Population

Modifier and Type	Method and Description
List<Population>	SimulationParameter.getPopulations() Get instantiated population list.
List<Population>	PopulationMonitor.getPopulations() Return all population actualy in PopulationMonitor
List<Population>	SimulationParameterCache.getPopulations()
List<Population>	SimulationParameterImpl.getPopulations()

Methods in fr.ifremer.isisfish.simulator with parameters of type Population

Modifier and Type	Method and Description
void	PopulationMonitor.addDiscard(TimeStep step, Population pop, org.nuiton.math.matrix.MatrixND discard) Only work for current step simulation
void	ResultManager.addResult(boolean force, TimeStep step, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultManager.addResult(boolean force, TimeStep step, String name, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultManager.addResult(TimeStep step, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	ResultManager.addResult(TimeStep step, String name, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	PopulationMonitor.applyReproductionMortality(Population pop) Applique de la mortalite naturelle aux poissons qui sont pas encore dans les classes de populations.
double	PopulationMonitor.getBiomass(Population pop) Return current biomass for population.
org.nuiton.math.matrix.MatrixND	PopulationMonitor.getCatch(Population pop) Get population catch.
org.nuiton.math.matrix.MatrixND	PopulationMonitor.getDiscard(TimeStep step, Population pop) Get discard.
org.nuiton.math.matrix.MatrixND	PopulationMonitor.getHoldCatch(Population pop) Get population hold catch.
org.nuiton.math.matrix.MatrixND	ResultManager.getMatrix(Population pop, String name) Retourne une matrice contenant tous les pas de temps.
org.nuiton.math.matrix.MatrixND	ResultManager.getMatrix(TimeStep step, Population pop, String name) Retourne la matrice stocke pour un pas de temps
org.nuiton.math.matrix.MatrixND	PopulationMonitor.getN(Population pop) Return current numbers for population.
org.nuiton.math.matrix.MatrixND	SimulationParameter.getNumberOf(Population pop)
org.nuiton.math.matrix.MatrixND	SimulationParameterCache.getNumberOf(Population pop)
org.nuiton.math.matrix.MatrixND	SimulationParameterImpl.getNumberOf(Population pop)
org.nuiton.math.matrix.MatrixND	PopulationMonitor.getRecruitment(TimeStep step, Population pop) TODO les reproductions qui sont trop veille pour encore servir doivent être supprimées. c-a-d date < currentDate - etalement - gap between repro recru Une autre facon de faire est de supprimer les repro == 0 car normalement toute la repro doit etre utilisé au bout d'un certain temps
org.nuiton.math.matrix.MatrixND	PopulationMonitor.getReproduction(TimeStep step, Population pop) Return reproduction.
double	PopulationMonitor.getTotalHoldCatch(Population pop) Population total hold catch.
void	PopulationMonitor.holdCatch(Population pop, org.nuiton.math.matrix.MatrixND catchPerStrategyMet)
void	PopulationMonitor.setDiscard(TimeStep step, Population pop, org.nuiton.math.matrix.MatrixND discard) Set discard.
void	PopulationMonitor.setN(Population pop, org.nuiton.math.matrix.MatrixND mat)
void	PopulationMonitor.setReproduction(TimeStep step, Population pop, org.nuiton.math.matrix.MatrixND repro) Set new reproduction.

Method parameters in fr.ifremer.isisfish.simulator with type arguments of type Population

Modifier and Type	Method and Description
void	PopulationMonitor.init(List<Population> pops) Initialise le monitor pour l'ensemble de pop passe en parametre.
void	SimulationParameter.setPopulations(List<Population> populations)
void	SimulationParameterCache.setPopulations(List<Population> populations)
void	SimulationParameterImpl.setPopulations(List<Population> populations)

Uses of Population in fr.ifremer.isisfish.ui.input

Fields in fr.ifremer.isisfish.ui.input declared as Population

Modifier and Type	Field and Description
protected Population	PopulationMigrationMigrationUI.bean
protected Population	PopulationGroupUI.bean
protected Population	PopulationSeasonsUI.bean
protected Population	PopulationPriceUI.bean
protected Population	PopulationMigrationImmigrationUI.bean
protected Population	PopulationEquationUI.bean
protected Population	PopulationMigrationUI.bean
protected Population	PopulationCapturabilityUI.bean
protected Population	PopulationBasicsUI.bean
protected Population	PopulationZonesUI.bean
protected Population	PopulationZonesEditorUI.bean
protected Population	PopulationMigrationEmigrationUI.bean
protected Population	PopulationMigrationEquationUI.bean
protected Population	PopulationSeasonSpacializedUI.bean
protected Population	PopulationRecruitmentUI.bean
protected Population	PopulationUI.bean
protected Population	SelectivityUI.population

Fields in fr.ifremer.isisfish.ui.input with type parameters of type Population

Modifier and Type	Field and Description
protected jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationGroupUI.validator
protected jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationSeasonsUI.validator
protected jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationPriceUI.validator
protected jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationEquationUI.validator
protected jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationMigrationUI.validator
protected jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationCapturabilityUI.validator
protected jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationBasicsUI.validator
protected jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationZonesUI.validator
protected jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationRecruitmentUI.validator

Methods in fr.ifremer.isisfish.ui.input that return Population

Modifier and Type	Method and Description
Population	InputAction.createPopulation(org.nuiton.topia.TopiaContext context, Species species)
Population	PopulationMigrationMigrationUI.getBean()
Population	PopulationGroupUI.getBean()
Population	PopulationSeasonsUI.getBean()
Population	PopulationPriceUI.getBean()
Population	PopulationMigrationImmigrationUI.getBean()
Population	PopulationEquationUI.getBean()
Population	PopulationMigrationUI.getBean()
Population	PopulationCapturabilityUI.getBean()
Population	PopulationBasicsUI.getBean()
Population	PopulationZonesUI.getBean()
Population	PopulationZonesEditorUI.getBean()
Population	PopulationMigrationEmigrationUI.getBean()
Population	PopulationMigrationEquationUI.getBean()
Population	PopulationSeasonSpacializedUI.getBean()
Population	PopulationRecruitmentUI.getBean()
Population	PopulationUI.getBean()
Population	SelectivityUI.getPopulation()

Methods in fr.ifremer.isisfish.ui.input that return types with arguments of type Population

Modifier and Type	Method and Description
jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationGroupUI.getValidator()
jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationSeasonsUI.getValidator()
jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationPriceUI.getValidator()
jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationEquationUI.getValidator()
jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationMigrationUI.getValidator()
jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationCapturabilityUI.getValidator()
jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationBasicsUI.getValidator()
jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationZonesUI.getValidator()
jaxx.runtime.validator.swing.SwingValidator<Population>	PopulationRecruitmentUI.getValidator()

Methods in fr.ifremer.isisfish.ui.input with parameters of type Population

Modifier and Type	Method and Description
Object	InputAction.addSelectivity(Population pop, String equation, Gear gear)
PopulationSeasonInfo	InputAction.createPopulationSeasonInfo(Population pop)
void	InputAction.createRecruitmentDistribution(Population pop)
void	InputAction.removePopulationSeasonInfo(Population pop, PopulationSeasonInfo populationSeasonInfo)
void	PopulationMigrationMigrationUI.setBean(Population bean)
void	PopulationGroupUI.setBean(Population bean)
void	PopulationSeasonsUI.setBean(Population bean)
void	PopulationPriceUI.setBean(Population bean)
void	PopulationMigrationImmigrationUI.setBean(Population bean)
void	PopulationEquationUI.setBean(Population bean)
void	PopulationMigrationUI.setBean(Population bean)
void	PopulationCapturabilityUI.setBean(Population bean)
void	PopulationBasicsUI.setBean(Population bean)
void	PopulationZonesUI.setBean(Population bean)
void	PopulationZonesEditorUI.setBean(Population bean)
void	PopulationMigrationEmigrationUI.setBean(Population bean)
void	PopulationMigrationEquationUI.setBean(Population bean)
void	PopulationSeasonSpacializedUI.setBean(Population bean)
void	PopulationRecruitmentUI.setBean(Population bean)
void	PopulationUI.setBean(Population bean)
void	SelectivityUI.setPopulation(Population population)

Uses of Population in fr.ifremer.isisfish.ui.input.check

Methods in fr.ifremer.isisfish.ui.input.check with parameters of type Population

Modifier and Type	Method and Description
static void	CheckRegion.check(Population pop, CheckResult result)

Uses of Population in fr.ifremer.isisfish.ui.input.model

Fields in fr.ifremer.isisfish.ui.input.model with type parameters of type Population

Modifier and Type	Field and Description
protected List<Population>	PopulationComboModel.populations Population list

Methods in fr.ifremer.isisfish.ui.input.model that return Population

Modifier and Type	Method and Description
Population	PopulationComboModel.getElementAt(int index)

Constructor parameters in fr.ifremer.isisfish.ui.input.model with type arguments of type Population

Constructor and Description
PopulationComboModel(List<Population> populations) Constructor with species list.

Uses of Population in fr.ifremer.isisfish.ui.input.tree.loadors

Methods in fr.ifremer.isisfish.ui.input.tree.loadors that return types with arguments of type Population

Modifier and Type	Method and Description
List<Population>	PopulationsNodeLoador.getData(Class<?> parentClass, String parentId, jaxx.runtime.swing.nav.NavDataProvider dataProvider)

Methods in fr.ifremer.isisfish.ui.input.tree.loadors with parameters of type Population

Modifier and Type	Method and Description
FisheryTreeNode	PopulationsNodeLoador.createNode(Population population, jaxx.runtime.swing.nav.NavDataProvider dataProvider)

Uses of Population in fr.ifremer.isisfish.ui.simulator

Methods in fr.ifremer.isisfish.ui.simulator that return types with arguments of type Population

Modifier and Type	Method and Description
List<Population>	SimulAction.getPopulations() Get population list to fill JList in paramUI.