fr.ifremer.isisfish.datastore

Class ResultStorageAbstract

java.lang.Object

fr.ifremer.isisfish.datastore.ResultStorageAbstract

All Implemented Interfaces:

ResultStorage, SimulationListener, SimulationResultGetter, SimulationResultListener

Direct Known Subclasses:

ResultMappedStorage, ResultStorageCSV, ResultStorageInMemory

public abstract class ResultStorageAbstract
extends Object
implements SimulationResultListener, SimulationResultGetter, ResultStorage

Classe abstraite servant a factoriser tous les traitements commun au differente implantation. Lorsqu'on herite de cette classe il reste a definir la lecture et l'ecriture reel des resultats (en memoire, en base, binary file, ...) Created: 24 juin 2014

Version:

$Revision: 4051 $ Mise a jour: $Date: 2014-07-21 13:01:58 +0200 (Mon, 21 Jul 2014) $ par : $Author: bpoussin $

Author:

Benjamin Poussin : poussin@codelutin.com

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
protected static class	ResultStorageAbstract.EntitySemanticsDecorator Convertie une entite, month, timestep en string et inversement.

Field Summary

Fields

Modifier and Type	Field and Description
protected ResultStorageAbstract.EntitySemanticsDecorator	decorator
protected Set<String>	enabledResult result enabled
protected SimulationStorage	simulation

Constructor Summary

Constructors

Constructor and Description
ResultStorageAbstract(SimulationStorage simulation) Les ResultStorage ne doivent pas etre instancier directement, mais recuperer a partir d'un SimulationStorage.getResultStorage()

Method Summary

Methods

Modifier and Type	Method and Description
void	addActiveRule(TimeStep step, Rule rule)
void	addResult(boolean force, TimeStep step, org.nuiton.math.matrix.MatrixND mat)
void	addResult(boolean force, TimeStep step, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	addResult(boolean force, TimeStep step, String name, org.nuiton.math.matrix.MatrixND mat)
void	addResult(boolean force, TimeStep step, String name, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	addResult(SimulationContext context, TimeStep step, String name, org.nuiton.math.matrix.MatrixND mat)
void	addResult(TimeStep step, org.nuiton.math.matrix.MatrixND mat)
void	addResult(TimeStep step, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	addResult(TimeStep step, String name, org.nuiton.math.matrix.MatrixND mat)
void	addResult(TimeStep step, String name, Population pop, org.nuiton.math.matrix.MatrixND mat)
void	afterSimulation(SimulationContext context) called after simulation
void	beforeSimulation(SimulationContext context) called before simulation
void	close() Close result storage.
protected org.nuiton.math.matrix.MatrixND	decorate(org.nuiton.math.matrix.MatrixND mat, org.nuiton.topia.TopiaContext tx)
void	delete() Delete all result for this result storage.
protected void	doAddResult(TimeStep step, String name, org.nuiton.math.matrix.MatrixND mat)
String	getInfo() Return some information on result storage.
TimeStep	getLastStep() Get last simulation date.
org.nuiton.math.matrix.MatrixND	getMatrix(Population pop, String name) Retourne une matrice contenant tous les pas de temps.
org.nuiton.math.matrix.MatrixND	getMatrix(Population pop, String name, org.nuiton.topia.TopiaContext tx) Retourne une matrice contenant tous les pas de temps.
org.nuiton.math.matrix.MatrixND	getMatrix(SimulationContext context, String name) Retourne une matrice contenant tous les pas de temps.
org.nuiton.math.matrix.MatrixND	getMatrix(SimulationContext context, TimeStep step, String name) Retourne la matrice stocke pour un pas de temps.
org.nuiton.math.matrix.MatrixND	getMatrix(String name) Retourne une matrice contenant tous les pas de temps.
org.nuiton.math.matrix.MatrixND	getMatrix(String name, org.nuiton.topia.TopiaContext tx) Retourne une matrice contenant tous les pas de temps.
org.nuiton.math.matrix.MatrixND	getMatrix(TimeStep step, Population pop, String name) Retourne la matrice stocke pour un pas de temps
org.nuiton.math.matrix.MatrixND	getMatrix(TimeStep step, Population pop, String name, org.nuiton.topia.TopiaContext tx) Retourne la matrice stocke pour un pas de temps
org.nuiton.math.matrix.MatrixND	getMatrix(TimeStep step, String name)
org.nuiton.math.matrix.MatrixND	getMatrix(TimeStep step, String name, org.nuiton.topia.TopiaContext tx) Retourne une matrice contenant tous les pas de temps.
protected org.nuiton.math.matrix.MatrixFactory	getMatrixFactory() sub class can overwrite this method to return specifique factory
abstract List<String>	getResultName() return list of all result name available
protected org.nuiton.topia.TopiaContext	getTx(org.nuiton.topia.TopiaContext tx) Try to find better tx.
boolean	isEnabled(String name) Permet de savoir si lorsque l'on ajoutera ce resultat, il sera sauvé ou non.
protected abstract org.nuiton.math.matrix.MatrixND	readResult(TimeStep step, String name) Return one result for step and name.
void	stepChange(SimulationContext context, TimeStep step) Receive event when simulation change step
protected List<String>	undecorate(List l) return new list with undecorate item
protected org.nuiton.math.matrix.MatrixND	undecorate(org.nuiton.math.matrix.MatrixND mat) Return undecorated version of matrix in argument
protected String	undecorate(Object o)
protected abstract void	writeActiveRule(TimeStep step, String name, String params) Write active rule
protected abstract void	writeResult(TimeStep step, String name, org.nuiton.math.matrix.MatrixND mat) write result

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

simulation

protected SimulationStorage simulation

decorator

protected ResultStorageAbstract.EntitySemanticsDecorator decorator

enabledResult

protected transient Set<String> enabledResult

result enabled

Constructor Detail

ResultStorageAbstract

public ResultStorageAbstract(SimulationStorage simulation)

Les ResultStorage ne doivent pas etre instancier directement, mais recuperer a partir d'un SimulationStorage.getResultStorage()

Parameters:

simulation - storage to get result

Method Detail

readResult

protected abstract org.nuiton.math.matrix.MatrixND readResult(TimeStep step,
                                         String name)

Return one result for step and name. Matrix returned must be undecorated (semantics must be string representation of object)

Parameters:

step -

name -

Returns:

writeResult

protected abstract void writeResult(TimeStep step,
               String name,
               org.nuiton.math.matrix.MatrixND mat)

write result

Parameters:

step -

name -

mat -

writeActiveRule

protected abstract void writeActiveRule(TimeStep step,
                   String name,
                   String params)

Write active rule

Parameters:

step -

name -

params -

getResultName

public abstract List<String> getResultName()

return list of all result name available

Specified by:

getResultName in interface ResultStorage

Returns:

getMatrixFactory

protected org.nuiton.math.matrix.MatrixFactory getMatrixFactory()

sub class can overwrite this method to return specifique factory

Returns:

getInfo

public String getInfo()

Return some information on result storage. Information depend on result storage type

Specified by:

getInfo in interface ResultStorage

Returns:

decorate

protected org.nuiton.math.matrix.MatrixND decorate(org.nuiton.math.matrix.MatrixND mat,
                                       org.nuiton.topia.TopiaContext tx)

undecorate

protected org.nuiton.math.matrix.MatrixND undecorate(org.nuiton.math.matrix.MatrixND mat)

Return undecorated version of matrix in argument

Parameters:

mat -

Returns:

new matrix undecorated

undecorate

protected List<String> undecorate(List l)

return new list with undecorate item

Parameters:

l -

Returns:

new list

undecorate

protected String undecorate(Object o)

delete

public void delete()

Description copied from interface: ResultStorage

Delete all result for this result storage. In case of sensitivity analysis, after export, result are no longer needed and can be deleted to save disk space.

Specified by:

delete in interface ResultStorage

close

public void close()

Description copied from interface: ResultStorage

Close result storage.

Specified by:

close in interface ResultStorage

addResult

public void addResult(TimeStep step,
             org.nuiton.math.matrix.MatrixND mat)
               throws IsisFishException

Specified by:

addResult in interface ResultStorage

Throws:

IsisFishException

addResult

public void addResult(TimeStep step,
             Population pop,
             org.nuiton.math.matrix.MatrixND mat)
               throws IsisFishException

Specified by:

addResult in interface ResultStorage

Throws:

IsisFishException

addResult

public void addResult(boolean force,
             TimeStep step,
             org.nuiton.math.matrix.MatrixND mat)
               throws IsisFishException

Specified by:

addResult in interface ResultStorage

Throws:

IsisFishException

addResult

public void addResult(boolean force,
             TimeStep step,
             Population pop,
             org.nuiton.math.matrix.MatrixND mat)
               throws IsisFishException

Specified by:

addResult in interface ResultStorage

Throws:

IsisFishException

addResult

public void addResult(TimeStep step,
             String name,
             Population pop,
             org.nuiton.math.matrix.MatrixND mat)
               throws IsisFishException

Specified by:

addResult in interface ResultStorage

Throws:

IsisFishException

addResult

public void addResult(TimeStep step,
             String name,
             org.nuiton.math.matrix.MatrixND mat)
               throws IsisFishException

Specified by:

addResult in interface ResultStorage

Throws:

IsisFishException

addResult

public void addResult(boolean force,
             TimeStep step,
             String name,
             Population pop,
             org.nuiton.math.matrix.MatrixND mat)
               throws IsisFishException

Specified by:

addResult in interface ResultStorage

Throws:

IsisFishException

addResult

public void addResult(boolean force,
             TimeStep step,
             String name,
             org.nuiton.math.matrix.MatrixND mat)
               throws IsisFishException

Specified by:

addResult in interface ResultStorage

Throws:

IsisFishException

doAddResult

protected void doAddResult(TimeStep step,
               String name,
               org.nuiton.math.matrix.MatrixND mat)
                    throws IsisFishException

Throws:

IsisFishException

isEnabled

public boolean isEnabled(String name)

Permet de savoir si lorsque l'on ajoutera ce resultat, il sera sauvé ou non. Check for result name returned by :

• Export.getNecessaryResult()
• Export.getNecessaryResult()
• Rule.getNecessaryResult()
• SimulationPlan.getNecessaryResult()

Specified by:

isEnabled in interface ResultStorage

Parameters:

name - result name

Returns:

true if result is enabled

addActiveRule

public void addActiveRule(TimeStep step,
                 Rule rule)
                   throws IsisFishException

Specified by:

addActiveRule in interface ResultStorage

Throws:

IsisFishException

getMatrix

public org.nuiton.math.matrix.MatrixND getMatrix(TimeStep step,
                                        Population pop,
                                        String name)

Retourne la matrice stocke pour un pas de temps

Specified by:

getMatrix in interface ResultStorage

Parameters:

step - le pas de temps que l'on souhaite

pop - la population pour lequelle on souhaite le resultat

name - le nom des resultats dont on veut la matrice

Returns:

La matrice demandée ou null si aucune matrice ne correspond a la demande.

getMatrix

public org.nuiton.math.matrix.MatrixND getMatrix(TimeStep step,
                                        Population pop,
                                        String name,
                                        org.nuiton.topia.TopiaContext tx)

Retourne la matrice stocke pour un pas de temps

Parameters:

step - le pas de temps que l'on souhaite

pop - la population pour lequelle on souhaite le resultat

name - le nom des resultats dont on veut la matrice

Returns:

La matrice demandée ou null si aucune matrice ne correspond a la demande.

getMatrix

public org.nuiton.math.matrix.MatrixND getMatrix(TimeStep step,
                                        String name)

Specified by:

getMatrix in interface ResultStorage

getMatrix

public org.nuiton.math.matrix.MatrixND getMatrix(TimeStep step,
                                        String name,
                                        org.nuiton.topia.TopiaContext tx)

Retourne une matrice contenant tous les pas de temps.

Specified by:

getMatrix in interface ResultStorage

Parameters:

name - le nom des resultats dont on veut une matrice globale.

step - le pas de temps que l'on souhaite

tx - TopiaContext a utiliser pour recuperer les resultats et donc les semantiques

Returns:

La matrice demandée ou null si aucune matrice ne correspond a la demande.

getMatrix

public org.nuiton.math.matrix.MatrixND getMatrix(Population pop,
                                        String name)

Retourne une matrice contenant tous les pas de temps.

Specified by:

getMatrix in interface ResultStorage

Parameters:

pop - la population pour lequel on souhaite la matrice

name - le nom des resultats dont on veut une matrice globale.

getMatrix

public org.nuiton.math.matrix.MatrixND getMatrix(Population pop,
                                        String name,
                                        org.nuiton.topia.TopiaContext tx)

Description copied from interface: ResultStorage

Retourne une matrice contenant tous les pas de temps.

Specified by:

getMatrix in interface ResultStorage

Parameters:

pop - la population pour lequel on souhaite la matrice

name - le nom des resultats dont on veut une matrice globale.

tx - la transaction a utiliser

getMatrix

public org.nuiton.math.matrix.MatrixND getMatrix(String name)

Retourne une matrice contenant tous les pas de temps.

Specified by:

getMatrix in interface ResultStorage

Parameters:

name - le nom des resultats dont on veut une matrice globale.

getMatrix

public org.nuiton.math.matrix.MatrixND getMatrix(String name,
                                        org.nuiton.topia.TopiaContext tx)

Retourne une matrice contenant tous les pas de temps.

Specified by:

getMatrix in interface ResultStorage

Parameters:

name - le nom des resultats dont on veut une matrice globale.

tx - TopiaContext a utiliser pour recuperer les resultats et donc les semantiques

getLastStep

public TimeStep getLastStep()

Get last simulation date.

Specified by:

getLastStep in interface ResultStorage

Returns:

last simulation date

addResult

public void addResult(SimulationContext context,
             TimeStep step,
             String name,
             org.nuiton.math.matrix.MatrixND mat)
               throws IsisFishException

Specified by:

addResult in interface SimulationResultListener

Throws:

IsisFishException

getMatrix

public org.nuiton.math.matrix.MatrixND getMatrix(SimulationContext context,
                                        TimeStep step,
                                        String name)

Description copied from interface: SimulationResultGetter

Retourne la matrice stocke pour un pas de temps.

Specified by:

getMatrix in interface SimulationResultGetter

step - le pas de temps que l'on souhaite

name - le nom des resultats dont on veut la matrice

Returns:

La matrice demandée ou null si aucune matrice ne correspond a la demande.

getMatrix

public org.nuiton.math.matrix.MatrixND getMatrix(SimulationContext context,
                                        String name)

Description copied from interface: SimulationResultGetter

Retourne une matrice contenant tous les pas de temps.

Specified by:

getMatrix in interface SimulationResultGetter

name - le nom des resultats dont on veut une matrice globale.

getTx

protected org.nuiton.topia.TopiaContext getTx(org.nuiton.topia.TopiaContext tx)

Try to find better tx. If argument is not null, return it. otherwize try to get tx in SimulationContext.

Parameters:

tx -

Returns:

afterSimulation

public void afterSimulation(SimulationContext context)

Description copied from interface: SimulationListener

called after simulation

Specified by:

afterSimulation in interface SimulationListener

beforeSimulation

public void beforeSimulation(SimulationContext context)

Description copied from interface: SimulationListener

called before simulation

Specified by:

beforeSimulation in interface SimulationListener

stepChange

public void stepChange(SimulationContext context,
              TimeStep step)

Description copied from interface: SimulationListener

Receive event when simulation change step

Specified by:

stepChange in interface SimulationListener