Hierarchy For All Packages

Package Hierarchies:

• org.coode.owlapi.oboformat,
• org.obolibrary.macro,
• org.obolibrary.obo2owl,
• org.obolibrary.oboformat.diff,
• org.obolibrary.oboformat.model,
• org.obolibrary.oboformat.parser,
• org.obolibrary.oboformat.writer,
• org.obolibrary.owl

Class Hierarchy

• java.lang.Object
  • org.obolibrary.macro.AbstractMacroExpansionVisitor (implements org.semanticweb.owlapi.model.OWLAxiomVisitorEx<O>, org.semanticweb.owlapi.model.OWLClassExpressionVisitorEx<O>, org.semanticweb.owlapi.model.OWLDataVisitorEx<O>)
  • org.semanticweb.owlapi.util.AbstractOWLOntologyStorer (implements org.semanticweb.owlapi.model.OWLOntologyStorer)
    • org.obolibrary.owl.LabelFunctionalSyntaxOntologyStorer
    • org.coode.owlapi.oboformat.OBOFormatStorer
  • org.obolibrary.oboformat.model.Clause
  • org.obolibrary.oboformat.diff.Diff
  • org.obolibrary.oboformat.model.Frame
  • org.obolibrary.obo2owl.IdTranslator
  • org.obolibrary.macro.MacroExpansionGCIVisitor
  • org.obolibrary.macro.MacroExpansionVisitor
  • org.obolibrary.macro.ManchesterSyntaxTool
  • org.obolibrary.obo2owl.Obo2OWLConstants
  • org.obolibrary.oboformat.model.OBODoc
  • org.obolibrary.oboformat.diff.OBODocDiffer
  • org.obolibrary.oboformat.parser.OBOFormatConstants
  • org.coode.owlapi.oboformat.OBOFormatOWLAPIParser (implements org.semanticweb.owlapi.io.OWLParser)
  • org.obolibrary.oboformat.parser.OBOFormatParser
  • org.obolibrary.oboformat.parser.OBOFormatParser.MyStream
  • org.coode.owlapi.oboformat.OBOFormatParserFactory (implements org.semanticweb.owlapi.io.OWLParserFactory)
  • org.coode.owlapi.oboformat.OBOFormatRenderer (implements org.semanticweb.owlapi.io.OWLRenderer)
  • org.obolibrary.oboformat.writer.OBOFormatWriter
  • org.obolibrary.oboformat.writer.OBOFormatWriter.OBODocNameProvider (implements org.obolibrary.oboformat.writer.OBOFormatWriter.NameProvider)
  • org.obolibrary.obo2owl.OboInOwlCardinalityTools
  • org.obolibrary.obo2owl.OWLAPIObo2Owl
  • org.obolibrary.obo2owl.OWLAPIOwl2Obo
  • org.semanticweb.owlapi.model.OWLOntologyFormat (implements java.io.Serializable)
    • org.obolibrary.owl.LabelFunctionalFormat
  • org.obolibrary.obo2owl.OwlStringTools
  • org.obolibrary.oboformat.model.QualifierValue
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • org.obolibrary.oboformat.model.FrameMergeException
      • java.io.IOException
        • org.obolibrary.oboformat.model.DocumentStructureException
          • org.obolibrary.oboformat.model.FrameStructureException
      • org.obolibrary.obo2owl.OboInOwlCardinalityTools.AnnotationCardinalityException
      • org.obolibrary.obo2owl.OWLAPIOwl2Obo.UntranslatableAxiomException
      • org.obolibrary.obo2owl.OwlStringTools.OwlStringException
      • java.lang.RuntimeException
        • org.semanticweb.owlapi.model.OWLRuntimeException
          • org.semanticweb.owlapi.io.OWLParserException
            • org.obolibrary.oboformat.parser.OBOFormatException
              • org.obolibrary.oboformat.parser.InvalidXrefMapException
              • org.obolibrary.oboformat.parser.OBOFormatDanglingReferenceException
              • org.obolibrary.oboformat.parser.OBOFormatParserException
  • org.obolibrary.oboformat.model.Xref
  • org.obolibrary.oboformat.parser.XrefExpander
  • org.obolibrary.oboformat.parser.XrefExpander.Rule
    • org.obolibrary.oboformat.parser.XrefExpander.EquivalenceExpansion
    • org.obolibrary.oboformat.parser.XrefExpander.GenusDifferentiaExpansion
    • org.obolibrary.oboformat.parser.XrefExpander.HasSubClassExpansion
    • org.obolibrary.oboformat.parser.XrefExpander.IsaExpansion
    • org.obolibrary.oboformat.parser.XrefExpander.RelationshipExpansion
    • org.obolibrary.oboformat.parser.XrefExpander.ReverseGenusDifferentiaExpansion

Interface Hierarchy

• org.obolibrary.oboformat.writer.OBOFormatWriter.NameProvider
• org.obolibrary.obo2owl.OboInOwlCardinalityTools.AnnotationCardinalityConfictHandler
• org.obolibrary.obo2owl.OboInOwlCardinalityTools.AnnotationCardinalityReporter

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • org.obolibrary.obo2owl.Obo2OWLConstants.Obo2OWLVocabulary
    • org.obolibrary.oboformat.model.Frame.FrameType
    • org.obolibrary.oboformat.parser.OBOFormatConstants.OboFormatTag